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Image Search Results
Journal: BMC Cancer
Article Title: CRKL regulates alternative splicing of cancer-related genes in cervical cancer samples and HeLa cell
doi: 10.1186/s12885-019-5671-8
Figure Lengend Snippet: Knockdown of CRKL in HeLa cells and its effect on cell proliferation. a The expression level of CRKL in HeLa cells after transiently transfected with CRKL specific shRNA or control vector, detected through RT-qPCR. b Cell proliferation analysis. Proliferation of control cells and treated HeLa cells were determined by luminescence read on a Luminometer after adding Cell Titer Glo reagent
Article Snippet: Not applicable,
Techniques: Knockdown, Expressing, Transfection, shRNA, Control, Plasmid Preparation, Quantitative RT-PCR
Journal: BMC Cancer
Article Title: CRKL regulates alternative splicing of cancer-related genes in cervical cancer samples and HeLa cell
doi: 10.1186/s12885-019-5671-8
Figure Lengend Snippet: Analysis of CRKL-regulated alternative splicing events in HeLa cells in cervical cancers samples. The ASEs change in same direction responded to CRKL expression levels in 40 cervical tumor samples and HeLa cells. RNA-seq quantification of ASEs detected in 40 cervical tumor samples and HeLa cells were respectively shown in box plots (Right panel) and bar plots (Left panel)
Article Snippet: Not applicable,
Techniques: Alternative Splicing, Expressing, RNA Sequencing
Journal: Oncology Reports
Article Title: Filamin B extensively regulates transcription and alternative splicing, and is associated with apoptosis in HeLa cells
doi: 10.3892/or.2020.7532
Figure Lengend Snippet: Knockdown of FLNB promotes proliferation and inhibits apoptosis of HeLa cells. (A) Relative mRNA expression of FLNB in HeLa cells after it was knocked down using FLNB -specific shRNA was determined by reverse transcription-qPCR. shFLNB_1 and shFLNB_2 indicate two biological repeats of HeLa cells transfected with FLNB-specific shRNA. Ctrl_1 and Ctrl_2 indicate two biological repeats of HeLa cells transfected with empty vector as controls. (B) Cell proliferation of shFLNB was measured by an MTT assay in HeLa cells. Cell apoptosis of cells transfected with shFLNB was measured by (C) flow cytometry and (D) subsequent analysis by a 7-ADD and Annexin V assay. *P<0.05 and **P<0.01 vs. respective Ctrl. FLNB , filamin B; sh, short hairpin; qPCR, quantitative PCR; Ctrl, control; 7-AAD, 7-amino actinomycin D; OD, optical density; PE, phycoerythrin.
Article Snippet:
Techniques: Knockdown, Expressing, shRNA, Reverse Transcription, Transfection, Plasmid Preparation, MTT Assay, Flow Cytometry, Annexin V Assay, Real-time Polymerase Chain Reaction, Control
Journal: Oncology Reports
Article Title: Filamin B extensively regulates transcription and alternative splicing, and is associated with apoptosis in HeLa cells
doi: 10.3892/or.2020.7532
Figure Lengend Snippet: GO and KEGG analysis of differentially expressed genes between short hairpin FLNB-transfected and control HeLa cells. Top 10 most enriched GO terms (biological process) of (A) upregulated and (B) downregulated genes upon FLNB knockdown. Rectangles around GO terms indicate notable cancer-related and cartilage development terms. Top 10 most enriched KEGG pathways of (C) upregulated and (D) downregulated genes upon FLNB knockdown. GO, Gene Ontology; KEGG, Kyoto Encyclopedia of Genes and Genomes; FLNB , filamin B.
Article Snippet:
Techniques: Transfection, Control, Knockdown
Journal: Oncology Reports
Article Title: Filamin B extensively regulates transcription and alternative splicing, and is associated with apoptosis in HeLa cells
doi: 10.3892/or.2020.7532
Figure Lengend Snippet: Validation of FLNB -regulated genes (DEGs). (A) Relative expression level (FPKM, up) and RT-qPCR measurement (down) of cartilage development-related DEGs. (B) Related expression level (FPKM, up) and RT-qPCR measurement (down) of apoptotic-related DEGs. (C) Western blot analysis of two apoptotic-related proteins in shFLNB and Ctrl HeLa cells. FLNB , filamin B; DEGs, differentially expressed genes; FPKM, fragments per kilobase of transcript per million fragments mapped; RT-qPCR, reverse transcription-quantitative PCR; sh, short hairpin; Ctrl, control; ATP7A, ATPase copper transporting α; BMP7, bone morphogenetic protein 7; COL2A1, collagen type II α 1 chain; MMP13, matrix metallopeptidase 13; IL23A, interleukin 23 subunit α; MALAT1, metastasis associated lung adenocarcinoma transcript 1; NAIP, NLR family apoptosis inhibitory protein; SLC25A36, solute carrier family 25 member 36; MAP2K7, mitogen-activated protein kinase kinase 7.
Article Snippet:
Techniques: Biomarker Discovery, Expressing, Quantitative RT-PCR, Western Blot, Reverse Transcription, Real-time Polymerase Chain Reaction, Control
Journal: Oncology Reports
Article Title: Filamin B extensively regulates transcription and alternative splicing, and is associated with apoptosis in HeLa cells
doi: 10.3892/or.2020.7532
Figure Lengend Snippet: Validation of FLNB -affected ASEs. Genome visualization (left panel) shows FLNB -regulated ASEs in shFLNB and control. (A) Validation of an ASE of VDR in HeLa cells. (B) Validation of an ASE of PACS2 in HeLa cells. (C) Validation of an ASE of MAP2K7 in HeLa cells. (D) Validation of an ASE of MALAT1 in HeLa cells. The number of junction reads were marked on the line representing splice junction composing ASE. The structures of ASEs are depicted in the top-right panel. The altered ratio of ASEs in RNA-sequencing and in reverse transcription-quantitative PCR were calculated and plotted (right panel, bottom). FLNB , filamin B; ASEs, alternative splicing events; sh/SH, short hairpin; NC, negative control; VDR, vitamin D receptor; PACS2, phosphofurin acidic cluster sorting protein 2; MAP2K7, mitogen-activated protein kinase kinase 7; MALAT1, metastasis associated lung adenocarcinoma transcript 1. *P<0.05 and ***P<0.001 vs. respectively NC.
Article Snippet:
Techniques: Biomarker Discovery, Control, RNA Sequencing, Reverse Transcription, Real-time Polymerase Chain Reaction, Alternative Splicing, Negative Control